Nature Communications ( IF 14.7 ) Pub Date : 2023-07-03 , DOI: 10.1038/s41467-023-38965-w Andrew C Hunt 1, 2 , Bastian Vögeli 1, 2 , Ahmed O Hassan 3 , Laura Guerrero 1, 2 , Weston Kightlinger 1, 2 , Danielle J Yoesep 1, 2 , Antje Krüger 1, 2 , Madison DeWinter 1, 2, 4 , Michael S Diamond 3, 5, 6, 7 , Ashty S Karim 1, 2 , Michael C Jewett 1, 2, 8, 9, 10
Antibody discovery is bottlenecked by the individual expression and evaluation of antigen-specific hits. Here, we address this bottleneck by developing a workflow combining cell-free DNA template generation, cell-free protein synthesis, and binding measurements of antibody fragments in a process that takes hours rather than weeks. We apply this workflow to evaluate 135 previously published antibodies targeting the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), including all 8 antibodies previously granted emergency use authorization for coronavirus disease 2019 (COVID-19), and demonstrate identification of the most potent antibodies. We also evaluate 119 anti-SARS-CoV-2 antibodies from a mouse immunized with the SARS-CoV-2 spike protein and identify neutralizing antibody candidates, including the antibody SC2-3, which binds the SARS-CoV-2 spike protein of all tested variants of concern. We expect that our cell-free workflow will accelerate the discovery and characterization of antibodies for future pandemics and for research, diagnostic, and therapeutic applications more broadly.
中文翻译:
用于抗体发现的快速无细胞表达和筛选平台
抗体发现受到个体表达和抗原特异性命中评估的瓶颈。在这里,我们通过开发一个工作流程来解决这个瓶颈,该工作流程将无细胞 DNA 模板生成、无细胞蛋白质合成和抗体片段的结合测量相结合,整个过程需要数小时而不是数周。我们应用此工作流程来评估 135 种先前发布的针对严重急性呼吸综合征冠状病毒 2 (SARS-CoV-2) 的抗体,包括先前获得 2019 年冠状病毒病 (COVID-19) 紧急使用授权的所有 8 种抗体,并证明了对最有效的抗体。我们还评估了来自用 SARS-CoV-2 刺突蛋白免疫的小鼠的 119 种抗 SARS-CoV-2 抗体,并确定了候选中和抗体,包括抗体 SC2-3、它与所有测试的相关变体的 SARS-CoV-2 刺突蛋白结合。我们期望我们的无细胞工作流程将加速抗体的发现和表征,以用于未来的流行病以及更广泛的研究、诊断和治疗应用。