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m1A and m6A modifications function cooperatively to facilitate rapid mRNA degradation
Cell Reports ( IF 7.5 ) Pub Date : 2022-09-06 , DOI: 10.1016/j.celrep.2022.111317
Sung Ho Boo 1 , Hongseok Ha 1 , Yoon Ki Kim 2
Affiliation  

N6-Methyladenosine (m6A), the most abundant internal mRNA modification, affects multiple steps in gene expression. Mechanistically, the binding of YTHDF2 to m6A on mRNAs elicits rapid mRNA degradation by recruiting several RNA degrading enzymes. Here, we show that N1-methyladenosine (m1A), another type of RNA modification, accelerates rapid m6A RNA degradation. We identify HRSP12 as an RNA-binding protein that recognizes m1A. The binding of HRSP12 to m1A promotes efficient interaction of YTHDF2 with m6A, consequently facilitating endoribonucleolytic cleavage via the RNase P/MRP complex. Transcriptome-wide analyses also reveal that mRNAs harboring both m1A and m6A are downregulated in an HRSP12-dependent manner compared with mRNAs harboring m6A only. Accordingly, a subset of endogenous circular RNAs that harbor m6A and associate with YTHDF2 in an HRSP12-dependent manner is also subjected to m1A-facilitated rapid degradation. Together, our observations provide compelling evidence for crosstalk between different RNA modifications.



中文翻译:

m1A 和 m6A 修饰协同作用以促进快速 mRNA 降解

N 6 -甲基腺苷 (m 6 A) 是最丰富的内部 mRNA 修饰,影响基因表达的多个步骤。从机制上讲,YTHDF2 与 m 6 A 在 mRNA 上的结合通过募集几种 RNA 降解酶引起快速 mRNA 降解。在这里,我们展示了另一种类型的 RNA 修饰N 1 -甲基腺苷 (m 1 A) 加速了 m 6 A RNA 的快速降解。我们将 HRSP12 鉴定为识别 m 1 A 的 RNA 结合蛋白。HRSP12 与 m 1 A 的结合促进了 YTHDF2 与 m 6的有效相互作用A,因此通过 RNase P/MRP 复合物促进内切核糖核酸裂解。转录组范围的分析还表明,与仅含有 m 6 A 的 mRNA 相比,含有 m 1 A 和 m 6 A 的 mRNA 以 HRSP12 依赖性方式下调。因此,含有 m 6 A 并以 HRSP12 依赖性方式与 YTHDF2 结合的内源性环状 RNA 子集也受到 m 1 A 促进的快速降解。总之,我们的观察结果为不同 RNA 修饰之间的串扰提供了令人信服的证据。

更新日期:2022-09-06
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