Understanding of molecular diffusion mechanisms in zeolite plays a crucial role in the processes of adsorption and separations and can greatly facilitate the design of zeolite at molecular level. However, compared with the case of free gas phase, the diffusion behaviors in channel of zeolite are much more complicated due to the confined pore environments. To dig more detailed information about the diffusivity mechanism of gas molecules in the zeolite pore, diffusion behaviors of H₂, He, N₂, CH₄ and CO₂ molecules in the one-dimensional (1-D) channel of AlPO₄-5 (AFI) zeolite-like materials were investigated using a combined classic molecular dynamics (MD) simulations and density functional theory (DFT) calculations. It is found that the diffusion behavior for light molecules (H₂ and He) at low loading in AlPO₄-5 channel is more freedom because of their small molecular diameter and low energy variation (ΔE) in the longitudinal direction of the pore. Then, transport of light gas molecules can be described as Knudsen diffusion and the molecular mass plays a key role in this case. Transports of N₂, CH₄ or CO₂, with larger molecular diameter and higher ΔE value, were proposed to compete with surface diffusion and their diffusivity should be controlled by the adsorption energy between gas molecule and pore wall. Therefore, the diffusion degree of gas molecules at low loading is decreased as follows: H₂ > He > N₂ > CH₄ > CO₂. When the gas molecule loading increases, the gas diffusion freedom will be limited due to the increased gas-gas and gas-porous media collisions. Thus, the diffusion of these gas molecules with higher concentration is dominated by the gas-gas and the gas-AFI interactions. DFT calculation results demonstrate that both gas-gas and the gas-AFI interaction energies depend on their van der Waals diameter. As a result, the diffusion of these gas molecules at higher loading in AlPO₄-5 channel is decreased as: He > H₂ > N₂ > CH₄ > CO₂. Our results confirmed that the diffusivity of gas molecules within the 1-D channel of AlPO₄-5 is controlled by the molecular mass or gas-wall interactions at low loading, while is dominated by the gas-gas/gas-wall interactions at high loading.