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A highly sensitive PNA-microarray system for miRNA122 recognition
Biotechnology Journal ( IF 3.2 ) Pub Date : 2022-02-28 , DOI: 10.1002/biot.202100587
Giuseppe Forte 1 , Giorgio Ventimiglia 2 , Massimiliano Pesaturo 3 , Salvatore Petralia 1
Affiliation  

Surface chemistry is a fundamental aspect of the development of the sensitive biosensor based on microarray technology. Here, an advanced PNA-microarray system for the detection of miRNA, composed by a multilayered Si/Al/Agarose component, is described. A straightforward optical signal enhancement is achieved thanks to a combination of the Al film mirror effect and the positive interference for the emission wavelength of the Cy5 fluorescent label tuned by the agarose film. The PNA-microarray was investigated for the detection of miRNA_122, resulting in a sensitivity of about 1.75 μM–1 and Limit of Detection in the range of 0.043 nM as a function of the capture probe sequence. The contribution, in terms of H-bonds amounts at 298 and 333 K, of the agarose coating to the dsPNA-RNA interactions was demonstrated by Molecular Dynamic simulations. These results pave the way for advanced sensing strategies suitable for the environmental monitoring and the public safety.

中文翻译:

用于 miRNA122 识别的高灵敏度 PNA 微阵列系统

表面化学是开发基于微阵列技术的灵敏生物传感器的一个基本方面。本文介绍了一种用于检测 miRNA 的先进 PNA 微阵列系统,该系统由多层 Si/Al/Agarose 组件组成。由于 Al 薄膜镜面效应和琼脂糖薄膜调谐的 Cy5 荧光标记发射波长的正干涉相结合,实现了直接的光学信号增强。研究了 PNA 微阵列以检测 miRNA_122,其灵敏度约为 1.75 μM –1和 0.043 nM 范围内的检测限作为捕获探针序列的函数。分子动力学模拟证明了琼脂糖涂层对 dsPNA-RNA 相互作用的贡献,就 298 和 333 K 的氢键数量而言。这些结果为适用于环境监测和公共安全的先进传感策略铺平了道路。
更新日期:2022-02-28
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