Sense of agency refers to the feeling of control over actions and action outcomes. Previous studies were mostly confined to the situation of performing actions to make objects appear, while it remains unexplored whether we experience sense of agency when making objects disappear. Here, we examined the temporal binding effect, an implicit index of sense of agency, in performing actions to make objects disappear and compared the magnitude of this effect in the appearing and disappearing situations. Results showed that the temporal binding effect emerged when object’s disappearances served as action outcomes. Moreover, the temporal binding effects in the appearing and disappearing situations did not differ significantly. Our findings extend the temporal binding effect to the situation of voluntarily making objects disappear, suggesting a comparable level of implicit sense of agency when voluntarily making objects disappear and appear.