2024
Effect of wogonin, an active ingredient of Scutellariae Radix, on fish infected with Aeromonas hydrophila
Cui J*, Dan Zeng, Peipei Guan, Jiang N*
Aquaculture International, 2024, doi: 10.1007/s10499-024-01571-8
2023
Editorial: Non-coding RNA assisted plant response to stresses
Jiang N, Cui J*
Frontiers in Plant Science, 2023, 14: 1276427
Genome-wide analyses of miRNAs in mycorrhizal plants in response to late blight and elucidation of the role of miR319c in tomato resistance
Zhou X, Wang Z, Su C, Cui J, Meng J, Luan Y
Horticultural Plant Journal. 2023,doi.org/10.1016/j.hpj.2023.03.016
Sl-lncRNA47980, a positive regulator affects tomato resistance to Phytophthora infestans
Su C, Wang Z, Cui J, Wang Z, Wang R, Meng J, Luan Y
Int J Biol Macromol. 2023, 248:125824
Editorial: lncRNA in plants: function, mechanisms and applications
Cui J*
Frontiers in Plant Science, 2023, 14: 1238185
Antioomycete activity and mechanism of acidic electrolyzed water: a novel sanitizer to prevent saprolegniasis in grass carp
Hu Yang, Jia Li, Huizhong Xu, Chunfeng Peng, Jun Cui, Shengbiao Hu, Liqiu Xia & Youming Zhang
Aquaculture International, 2023, 31: 957–973
2022
New insight into the molecular mechanism of miR482/2118 during plant resistance to pathogens
Liao L, Xie B, Guan P, Jiang N, Cui J*
Front. Plant Sci. 2022, 13:1026762
The lncRNA39896-miR166b-HDZs module affects tomato resistance to Phytophthora infestans
Hong Y, Zhang Y, Cui J, Meng J, Chen Y, Zhang C, Yang J, Luan Y
J Integr Plant Biol. 2022, 64(10):1979-1993
Characterization of lncRNAs in mycorrhizal tomato and elucidation of the role of lncRNA69908 in disease resistance
Xiaoxu Zhou, Jun Cui, Yushi Luan
Biochemical and Biophysical Research Communications. 2022, 634: 203-210
SlmiR482e-5p regulates tomato resistance to Phytophthora infestans infection along with slmiR482e-3p via sllncRNA39298-mediated inhibition
Weiwei Liu, Jun Cui, Yushi Luan
Physiological and Molecular Plant Pathology, 2022, 121：101875
Study on the Expression Change of Lysozymes and Its Immune Effect in Grass Carp (Ctenopharyngodon idellus) after Infected with Aeromonas veronii
Pei Chen, Duo Jin, Shijia Yang, Xiaojing Yu, Ganfeng Yi, Shengbiao Hu, Yunjun Sun, Yibo Hu, Jun Cui, Jie Rang, Liqiu Xia
Microbial Pathogenesis, 2022, 169:105646
The isolation of a novel Streptomyces termitum and identification its active substance against fish pathogens
Yanan Peng, Ximiao Lai, Pan Wang, Wensu Long, Feng Zhai, Shengbiao Hu, Yibo Hu, Jun Cui, Weitao Huang, Ziquan Yu, Shijia Yang, GanfengYia, Liqiu Xia
Reproduction and Breeding. 2022, 2(3): 95-105
The Global Regulator PhoU Positively Controls Growth and Butenyl-Spinosyn Biosynthesis in Saccharopolyspora pogona
Jianli Tang, Jiangming Chen, Yang Liu, Jinjuan Hu, Ziyuan Xia, Xiaomin Li, Haocheng He, Jie Rang, Yunjun Sun, Ziquan Yu, Jun Cui, Liqiu Xia
Frontier in Microbiology, 2022, 13: 904627
Genetic Modifications of Critical Regulators Provide New Insights into Regulation Modes of Raw-Starch-Digesting Enzyme Expression in Penicillium
Shengfang Zhao, Boyu Xiang, Le Yang, Jie Chen, Cui Zhu, Yu Chen, Jun Cui, Shengbiao Hu, Yibo Hu
Biotechnology for Biofuels and Bioproducts, 2022, 15:62
Genome-wide identification and characterization of the tomato F-box associated (FBA) protein family and expression analysis of their responsiveness to Phytophthora infestans
Chenglin Su, Jun Cui, Yarong Liu, Yushi Luan
Gene, 2022, 821: 146335
Association of a single nucleotide polymorphism of the Leptin gene with growth traits in Takifugu rubripes
Juan Wang#, Jun Cui#, Feng Zhang, Xuemei Qiu, Xiuli Wang
The Israeli journal of aquaculture = Bamidgeh, 2022, 1558849
Overexpression of lncRNA08489 enhances tomato immunity against Phytophthora infestans by decoying miR482e-3p
Weiwei Liu, Jun Cui, Yushi Luan
Biochemical and Biophysical Research Communications, 2022, 587: 36-41
2021
Isolation of a new Streptomyces virginiae W18 against fish pathogens and its effect on disease resistance mechanism of Carassius auratus
Wenbin Hu, Xiaojing Yu, Duo Jin, Feng Zhai, Pengji Zhou, Khan Tahir Ali, Jun Cui, Pan Wang, Xiong Liu, Yunjun Sun, Ganfeng Yi, Liqiu Xia
Microb Pathog. 2021, 161(Pt A):105273
Function identification of miR394 in tomato resistance to Phytophthora infestans
Yuanyuan Zhang, Yuhui Hong, Yarong Liu, Jun Cui, Yushi Luan
Plant Cell Reports. 2021, 40(10): 1831-1844
Optimized combination methods for exploring and verifying of disease resistant transcription factors in melon
Zhicheng Wang, Yushi Luan, Xiaoxu Zhou, Jun Cui, Feishi Luan, Jun Meng
Briefings in Bioinformatics, 2021, 22(4): bbaa326
Differences in DNA methylation between slow and fast muscle in Takifugu rubripes
Haoze Wang#, Jun Cui#, Xuemei Qiu, Xiuli Wang
Gene. 2021, 801: 145853
Effects of different NH4+/NO3- ratios on the photosynthetic and physiology responses of blueberry (Vaccinium spp.) seedlings growth
Yuanyuan Zhang, Junping Tian, Jun Cui, Yuhui Hong, Yushi Luan
Journal of Plant Nutrition. 2021，44：854-864
2020
Interactions and links among the noncoding RNAs in plants under stresses
Xiaoxu Zhou, Jun Cui, Jun Meng, Yushi Luan
Theoretical and Applied Genetics, 2020, 133: 3235-3248
Sl-lncRNA15492 interacts with Sl-miR482a and affects Solanum lycopersicum immunity against Phytophthora infestans
Ning Jiang#, Jun Cui#, Xinxin Hou, Guanglei Yang, Yu Xiao, Lu Han, Jun Meng, Yushi Luan
Plant Journal. 2020, 103(4):1561-1574
Transcriptome Signatures focusing on immune-related genes in the Livers, Spleens and Kidneys of Male and Female Takifugu rubripes
Jun Cui, Lei Men, Zhicheng Wang, Xuemei Qiu, Xiuli Wang
International Journal of Agriculture and Biology, 2020, 24: 783-793
PmliPred: a method based on hybrid model and fuzzy decision for plant miRNA-lncRNA interaction prediction
Qiang Kang, Jun Meng, Jun Cui, Yushi Luan
Bioinformatics, 2020, 36(10):2986-2992
Genome-wide identification, characterization and expression analysis of the TLP gene family in melon (Cucumis melo L.)
Yarong Liu, Jun Cui, Xiaoxu Zhou, Yushi Luan, Feishi Luan
Genomics, 2020, 112：2499-2509
Identification of lncRNAs and their regulatory relationships with target genes and corresponding miRNAs in melon response to powdery mildew fungi
Xiaoxu Zhou, Jun Cui, Haonan Cui, Ning Jiang, Xinxin Hou, Shi Liu, Peng Gao, Yushi Luan, Jun Meng, Feishi Luan
Gene. 2020, 735: 144403
LncRNA39026 enhances tomato resistance to Phytophthora infestans by decoying miR168a and inducing PR genes expression.
Xinxin Hou, Jun Cui, Weiwei Liu, Ning Jiang, Xiaoxu Zhou, Hongyan Qi, Jun Meng, Yushi Luan
Phytopathology. 2020, 110(4): 873-880
Genome-wide identification of lncRNAs and analysis of ceRNA networks during tomato resistance to Phytophthora infestans
Jun Cui, Ning Jiang, Xinxin Hou, Sihan Wu, Qiang Zhang, Jun Meng, Yushi Luan
Phytopathology. 2020, 110(2): 456-464
2019
The complete mitochondrial genome of the hybrid of Takifugu obscurus (♀) x T. rubripes (♂)
Dongyu Dou, Xiuli Wang, Haoyong Zhu, Yulong Bao, Yaohui Wang, Jun Cui, Xuesong Meng, Yongxiang Zhu, Xuemei Qiu
Mitochondrial DNA Part B, 2019, 4: 3196-3197
Expression, purification and characterization of recombinant interferon-γ of Takifugu rubripes in Pichia pastoris.
Derong Kong, Zhicheng Wang, Lin Zang, Jun Cui, Hui Li, He Sun, Xuemei Qiu, Haiying Liu, Xiuli Wang
International Journal of Agriculture and Biology, 2019, 21: 19-24
Transcriptional differences provide insight into environmental acclimatization in wild amur ide (Leuciscus waleckii) during spawning migration from an alkalized lake to freshwater river.
Baohua Chen, Jian Xu, Jun Cui, Fei Pu, Wenzhu Peng, Lin Chen, Peng Xu
Genomics, 2019, 111(3): 267-276
Tomato lncRNA23468 functions as a competing endogenous RNA to modulate NBS-LRR genes by decoying miR482b in tomato - Phytophthora infestans interaction
Ning Jiang, Jun Cui, Yunsheng Shi, Guanglei Yang, Xiaoxu Zhou, Xinxin Hou, Jun Meng, Yushi Luan
Horticulture Research, 2019, 6: 28
Comparative transcriptome analysis shows the defense response networks regulated by miR482b
Ning Jiang, Jun Cui, Guanglei Yang, Jun Meng, Yushi Luan
Plant Cell Reports, 2019, 38: 1-13
Whole Genomic SNPs and SSRs Development based on High-Throughout Transcript Sequencing in Sea Cucumber (Apostichopus japonicus)
Xiaoxu Zhou#, Jun Cui#, Xuemei Qiu, Xiuli Wang
International Journal of Agriculture and Biology, 2019, 22: 877-881
Integration of small RNAs and transcriptome sequencing in Chinese sea cucumber, Russian sea cucumber and their hybrids reveals a complex regulatory network
Zhicheng Wang#, Jun Cui#, Jian Song, Meng Gou, Haoze Wang, Kailun Gao, Xuemei Qiu, Xiuli Wang, Yaqing Chang
Comparative Biochemistry and Physiology Part D: Genomics and Proteomics, 2019, 29: 1-13
LncRNA33732- respiratory burst oxidase module associated with WRKY1 in tomato- Phytophthora infestans interaction.
Jun Cui, Ning Jiang, Jun Meng, Guanglei Yang, Weiwei Liu, Xiaoxu Zhou, Ning Ma, Xinxin Hou, Yushi Luan
Plant Journal, 2019, 97(5): 933-946
2018
Function identification of miR482b, a negative regulator during tomato resistance to Phytophthora infestans
Ning Jiang, Jun Meng, Jun Cui, Guangxin Sun, Yushi Luan
Horticulture Research, 2018, 5:9
SpWRKY6 acts as a positive regulator during tomato resistance to Phytophthora infestans infection
Yuhui Hong, Jun Cui, Zhen Liu, Jun Meng, Yushi Luan
Biochemical and Biophysical Research Communications, 2018, 506: 787-792
Effective enhancement of resistance to Phytophthora infestans by overexpression of miR172a and b in Solanum lycopersicum
Yushi Luan, Jun Cui, Jie Li, Ning Jiang, Ping Liu, Jun Meng
Planta, 2018, 247:127-138
A tomato Nucleotide Binding Sites-Leucine Rich Repeat gene is positively involved in plant resistance to Phytophthora infestans
Ning Jiang, Jun Cui, Jun Meng, Yushi Luan
Phytopathology, 2018, 108: 980-987
The regulatory networks conferred by IFN-γ in the kidney of Takifugu rubripes
Derong Kong#, Jun Cui#, Zhicheng Wang, Lin Zang, He Sun, Ziwen Hu, Xin Li, Xuemei Qiu, Chen Jiang, Haiying, Liu, Tao Zhang, Shengcong Liu, Zhiqiang Jiang, Xuesong Meng, Xiuli Wang
International Journal of Agriculture and Biology, 2018, 20: 2189-2195
Comparative transcriptome analysis reveals growth-related genes in juvenile Chinese sea cucumber, Russian sea cucumber and their hybrids.
Zhicheng Wang#, Jun Cui# , Jian Song, Haoze Wang, Kailun Gao, Xuemei Qiu, Meng Gou, Xin Li, Ziwen Hu, Yaqing Chang, Xiuli Wang
Marine Biotechnology, 2018, 20: 193-205
Identification and characterization of Defensin genes conferring Phytophthora infestans resistance in tomato.
Jun Cui, Ning Jiang, Jun Meng, Xinxin Hou, Guanglei Yang, Yushi Luan
Physiological and Molecular Plant Pathology, 2018, 103: 28-35
Tomato MYB49 enhances resistance to Phytophthora infestans and tolerance to water deficit and salt stress.
Jun Cui, Ning Jiang, Xiaoxu Zhou, Xinxin Hou, Guanglei Yang, Jun Meng, Yushi Luan
Planta, 2018, 248: 1487-1503
Transcriptome signatures of tomato leaf induced by Phytophthora infestans and functional identification of transcription factor SpWRKY3
Jun Cui, Pinsan Xu, Jun Meng, Jingbin Li, Ning Jiang, Yushi Luan
Theoretical and Applied Genetics, 2018, 131: 787-800
2017
Characterization and function of microRNA*s in Plants
Weiwei Liu, Jun Meng, Jun Cui, Yushi Luan
Frontiers in Plant Science, 2017, 8: 2200
Genome-wide analysis of response regulator genes in Solanum lycopersicum.
Jun Cui, Ning Jiang, Jun Meng, Yushi Luan
Bioinformatics Research and Applications, 2017, 379-384
Molecular cloning, characterization and expression analysis of Wap65 from the crucian carp
Jun Cui, Xiaoxu Zhou, Zhicheng Wang, Derong Kong, Xuemei Qiu, Hongdi Wang, Xiuli Wang
Pakistan Journal of Zoology, 2017, 49(3): 915-921
Comparative transcriptome analysis between resistant and susceptible tomato allows the identification of lncRNA16397 conferring resistance to Phytophthora infestans by co-expressing glutaredoxin.
Jun Cui, Yushi Luan, Ning Jiang, Hang Bao, Jun Meng
Plant Journal, 2017, 89(3): 577-589
2016
The complete mitochondrial genome of Microdevario kubotai (Cypriniformes Cyprinidae Danioninae Microdevario)
Songhao Zhang, Yanliang Jiang, Jun Cui, Shahid Mahboob, K. Al-Ghanim, Peng Xu, Jinsheng Sun
Mitochondrial DNA Part A, 2016, 27(2): 1150-1151
The complete mitochondrial genome of Paracheirodon axelrodi (Characiformes: Characidae: Paracheirodon).
Songhao Zhang, Jun Cui, Ru Xu, Peng Xu, Jinsheng Sun
Mitochondrial DNA Part A, 2016, 27(1): 230-231
The complete mitochondrial genome of Rasbora borapetensis (Cypriniformes: Cyprinidae: Rasbora).
Songhao Zhang, Jun Cui, Chun-Yan Li, Shahid Mahboob, K. Al-Ghanim, Peng Xu, Jinsheng Sun
Mitochondrial DNA Part A, 2016, 27(2): 861-862
MiR1918 enhances tomato sensitivity to Phytophthora infestans infection
Yushi Luan, Jun Cui, Weichen Wang, Jun Meng
Scientific Reports, 2016, 6: 35858
Transcriptome analysis of tube foot and large scale marker discovery in sea cucumber, Apostichopus japonicus
Xiaoxu Zhou#, Hongdi Wang#, Jun Cui#, Xuemei Qiu, Yaqing Chang, Xiuli Wang
Comparative Biochemistry and Physiology Part D: Genomics and Proteomics, 2016, 20: 41-49
Comparative transcriptome analysis of papilla and skin in the sea cucumber, Apostichopus japonicus
Xiaoxu Zhou#, Jun Cui#, Shikai Liu, Derong Kong, He Sun, Chenlei Gu, Hongdi Wang, Xuemei Qiu, Yaqing Chang, Zhanjiang Liu, Xiuli Wang
PeerJ, 2016, 4: e1779
The complete mitochondrial genome of Channa marulius (Perciformes Channidae Channa)
Jun Cui, Punhal Lashari, Songhao Zhang, Kai Wang, Jian Xu, Muhammad Younis Laghari, Shahid Mahboob, Khalid A. Al-Ghanim, Yan Zhang, Peng Xu
Mitochondrial DNA Part A, 2016, 27(2): 1148-1149
2015
Complete mitochondrial genome of Northern Sheatfish (Silurus soldatovi)
Kai Wang, Jian Xu, Jun Cui, Qiang Li, Peng Xu, Xiaowen Sun
Mitochondrial DNA, 2015, 26(6): 891-892
High-throughput sequencing reveals differential expression of miRNAs in tomato inoculated with Phytophthora infestans
Yushi Luan, Jun Cui, Junmiao Zhai, Jie Li, Lu Han, Jun Meng
Planta, 2015, 241: 1405-1416
Identification and characterization of microRNAs from longitudinal muscle and respiratory tree in sea cucumber (Apostichopus japonicus) using high-throughput sequencing
Hongdi Wang#, Shikai Liu#, Jun Cui#, Chengze Li, Yucai Hu, Wei Zhou, Yaqing Chang, Xuemei Qiu, Zhanjiang Liu, Xiuli Wang
PLoS One, 2015, 10(8): e0134899
The complete mitochondrial genome of Cobitis lutheri (Cypriniformes: Cobitidae: Cobitis)
Jun Cui, Jian Xu, Qiang Li, Kai Wang, Peng Xu, Xiaowen Sun
Mitochondrial DNA, 2015, 26(6): 875-876
Transcriptional profiling reveals differential gene expression of Amur Ide (Leuciscus waleckii) during spawning migration
Jun Cui, Jian Xu, Songhao Zhang, Kai Wang, Yanliang Jiang, Shahid Mahboob, Khalid A. Al-Ghanim, Peng Xu
International Journal of Molecular Sciences, 2015, 16(6): 13959-13972
2014
Transcriptome analysis of the gill of Takifugu rubripes using Illumina sequencing for discovery of SNPs
Jun Cui, Hongdi Wang, Shikai Liu, Xuemei Qiu, Zhiqiang Jiang, Xiuli Wang
Comparative Biochemistry and Physiology Part D: Genomics and Proteomics, 2014, 10: 44-51
Characterization and expression analysis of microRNAs in the tube foot of sea cucumber Apostichopus japonicus
Hongdi Wang, Shikai Liu, Jun Cui, Chengze Li, Xuemei Qiu, Yaqing Chang, Zhanjiang Liu, Xiuli Wang
PloS One, 2014, 9(11): e111820
Molecular cloning, characterization and expression analysis of Melanotransferrin from the sea cucumber Apostichopus japonicus
Xuemei Qiu, Dong Li, Jun Cui, Yang Liu, Xiuli Wang
Molecular Biology Reports, 2014, 41: 3781-3791
SNP discovery from transcriptome of the swimbladder of Takifugu rubripes
Jun Cui, Hongdi Wang, Shikai Liu, Lifu Zhu, Xuemei Qiu, Zhiqiang Jiang, Xiuli Wang, Zhanjiang Liu
PLoS One, 2014, 9(3): e92502
Transcriptome analysis of the gill and swimbladder of Takifugu rubripes by RNA-Seq
Jun Cui, Shikai Liu, Bing Zhang, Hongdi Wang, Hongjuan Sun, Shuhui Song, Xuemei Qiu, Yang Liu, Xiuli Wang, Zhiqiang Jiang, Zhanjiang Liu
PLoS One, 2014, 9(1): e85505
