Selected Publication：
* Corresponding author; # Co-first author
Chen, Z.#; Chen, W.#; Xu, C.#; Song, H.; Ji, X.; Jiang, H.; Duan, H.; Li, Z.; Gao, W.; Yao, T.; Zhang, Z.; He, L.; Yin, Y.; Yang, N.; Tian, W.; Wu, J.; Li, X.* Near-infrared fluorogenic RNA for in vivo imaging and sensing. Nature Communications (IF=16.6), 2024, Accepted.
Zhang, Z.#; Rong, X.#; Xie, T.; Song, H.; Li, Z.; Zhen, S.; Wu, J.; Jaffrey, S R. and Li, X.* Fluorogenic CRISPR for genomic DNA imaging. Nature Communications (IF=16.6), 2024, 15, 934.
Zhang, Y.#; Xu, Z.#; Xiao, Y.#; Jiang, H.#; Zuo, X.; Li, X.* and Fang, X.* Structural mechanisms for binding and activation of a contact-quenched fluorophore by RhoBAST. Nature Communications (IF=16.6), 2024, 15, 4026.
Chen, Z.; Chen, W.; Zhayila, R.; Jiang, H.; Wu, J.; and Li, X.* Genetically encoded RNA-based sensors with Pepper fluorogenic aptamer. Nucleic Acids Research (IF=14.9), 2023, 51 (16), 8322–8336.
Publications at CAS：
2024年
4. Near-infrared fluorogenic RNA for in vivo imaging and sensing
Chen, Z.#; Chen, W.#; Xu, C.#; Song, H.; Ji, X.; Jiang, H.; Duan, H.; Li, Z.; Gao, W.; Yao, T.; Zhang, Z.; He, L.; Yin, Y.; Yang, N.; Tian, W.; Wu, J.; Li, X.*
Nature Communications (IF=16.6), 2024, Accepted
3. Structural mechanisms for binding and activation of a contact-quenched fluorophore by RhoBAST
Zhang, Y.#; Xu, Z.#; Xiao, Y.#; Jiang, H.#; Zuo, X.; Li, X.* and Fang, X.*
Nature Communications (IF=16.6), 2024, 15, 4026.
2. Fluorogenic CRISPR for genomic DNA imaging
Zhang, Z.#; Rong, X.#; Xie, T.; Song, H.; Li, Z.; Zhen, S.; Wu, J.; Jaffrey, S R; and Li, X.*
Nature Communications (IF=16.6), 2024, 15, 934.
1. Progress in RNA dynamic imaging technology in live cells
Gao, W.; Chen, Z.; Rong, X.; and Li, X.*
Scientia Sinica Vitae (Invited Review), 2024, 54, 651–667.
2023年
5. Genetically encoded RNA-based sensors with Pepper fluorogenic aptamer
Chen, Z.; Chen, W.; Zhayila, R.; Jiang, H.; Wu, J.; and Li, X.*
Nucleic Acids Research (IF=14.9), 2023, 51 (16), 8322–8336.
4. Intricate 3D architecture of a DNA mimic of green fluorescent protein
Passalacqua, L. F. M.; Banco, M. T.; Moon, J. D.; Li, X.; Jaffrey, S. R.; and Ferré-D’Amaré, A. R.*
Nature (IF=64.8), 2023, 618, 1078-1084.
3. In situ self-assembly of fluorogenic RNA nanozipper enables real-time imaging of single viral mRNA translation
Zhang, Y.#; Wang, Z.#; Tian, Y.; Jiang, H.; Zhao, L.; Kong, D.; Li, X.; Pang, D.; Liu, S.*
Angewandte Chemie International Edition (IF=16.6), 2023, e202217230.
2. In vivo single-molecule RNA structural profiling
Chen, Z.#; Duan, H.#; and Li, X.*
Trends in Biochemical Sciences (IF=13.8), 2023, 48 (3), 211-212.
1. Single mRNA imaging with fluorogenic RNA aptamers and small-molecule fluorophores
Chen, W.#; Zhao, X.#; Yang, N.*; and Li, X.*
Angewandte Chemie International Edition (IF=16.6), 2023, e202209813.
2022年
2. The fluorescent aptamer Squash extensively repurposes the adenine riboswitch fold
Truong, L.; Kooshapur, H.; Dey, S. K.; Li, X.; Tjandra, N.; Jaffrey, S. R.; and Ferré-D’Amaré, A. R.*
Nature Chemical Biology (IF=14.8), 2022, 18 (2), 191-198.
1. Self-assembly of intracellular multivalent RNA complexes using dimeric Corn and Beetroot aptamers.
Wu, J.; Svensen, N.; Song, W.; Kim, H.; Zhang, S.; Li, X.; and Jaffrey, S. R.*
Journal of the American Chemical Society (IF=15.0), 2022, 144 (12), 5471-5477.
2021年
2. Engineering fluorophore recycling in a fluorogenic RNA aptamer.
Li, X.*; Wu, J.; and Jaffrey, S. R.*
Angewandte Chemie International Edition (IF=16.6), 2021, 60 (45), 24153-24161.
1. Label-free bioassay with graphene oxide-based fluorescent aptasensors: A review.
Ma, K.; Li, X.*; Xu, B.; and Tian, W.
Analytica Chimica Acta (IF=6.911. Invited Review), 2021, 1188, 338859.
