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Journal of Molecular Modeling
基本信息
期刊名称 Journal of Molecular Modeling
J MOL MODEL
期刊ISSN 1610-2940
期刊官方网站 https://www.springer.com/894
是否OA No
出版商 Springer Verlag
出版周期 Irregular
文章处理费 登录后查看
始发年份 1995
年文章数 383
影响因子 2.1(2023)  scijournal影响因子  greensci影响因子
中科院SCI期刊分区
大类学科 小类学科 Top 综述
化学4区 BIOCHEMISTRY & MOLECULAR BIOLOGY 生化与分子生物学4区
BIOPHYSICS 生物物理4区
CHEMISTRY, MULTIDISCIPLINARY 化学综合4区
COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS 计算机:跨学科应用4区
CiteScore
CiteScore排名 CiteScore SJR SNIP
学科 排名 百分位 3.5 0.332 0.543
Computer Science
Computational Theory and Mathematics
75/176 57%
Computer Science
Computer Science Applications
436/817 46%
Chemistry
Inorganic Chemistry
43/79 46%
Chemistry
Physical and Theoretical Chemistry
112/189 41%
Chemistry
Organic Chemistry
128/211 39%
补充信息
自引率 9.5%
H-index 61
SCI收录状况 Science Citation Index Expanded
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PubMed Central (PMC) http://www.ncbi.nlm.nih.gov/nlmcatalog?term=1610-2940%5BISSN%5D
投稿指南
期刊投稿网址 https://www.editorialmanager.com/jmmo
收稿范围
The Journal of Molecular Modeling publishes high quality specialized 3D molecular modeling studies that pass peer review and fall within the scope of the journal. Because of the number of manuscripts submitted to the journal and the high rejection rate, the following guidelines are provided to help assess your own work:

Computer-Aided Drug Design
 

Computer-aided molecular design, rational drug design, de novo ligand design, receptor modeling and docking, molecular-dynamics simulations used for drug design.
Manuscripts that report new methodology are welcome, as are those that report new techniques and their validation. Extensive validation on a number of diverse datasets is necessary.
Studies that use commercially available techniques or web services for docking, ADMET evaluation or MD simulations are discouraged.
Protein structures used for docking studies must be equilibrated adequately using MD simulations of at least 500 ns.
At least 3 different conformations of the target (from multiple crystal structures or generated using an MD simulation of at least 500ns) must be used to generate consensus poses for docking studies.
Docked poses must again be proved stable using at least three MD simulations, each  of at least 200, or a single simulation of at least 500ns.
MD simulations should be analyzed to identify key interactions and provide a binding model for predictive drug design. Simply testing the short-term stability of the docked pose using RSMD or radius of gyration is discouraged.

Life Science Modeling
 
Homology modeling
Homology models are welcome if they are validated by adequate MD simulations (at least 500 ns).
Simulation of proteins, DNA, carbohydrates and other biopolymers
Manuscripts that provide mechanistic insights or offer novel interpretation of the experimental data are welcome. Molecular-dynamics simulations must be run for at least 500ns and in triplicate (or correspondingly longer single simulations) and sampling convergence demonstrated.
 
Modeling biological reaction mechanisms
Modeling studies of biological reaction mechanisms are welcome. Protein flexibility must be taken into account.
 
Combined experimental/computational studies in which calculations play a dominant role
Manuscripts that place the main emphasis on the calculations and use them to provide information not available from experiment are welcome.
Manuscripts in which standard calculations are used as an adjunct to an otherwise experimental study are discouraged.
Please do not hesitate to contact the editorial office if you are in doubt as to whether your work falls within the scope of the Journal.
收录体裁
投稿指南 https://link.springer.com/journal/894/submission-guidelines
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