2024年

1.       Qi, S. X.; Peng, Y.; Wang, G.; Zhang, X.; Liu, M. L.*; He, L. C*. A tale of dual functions of SERF family proteins in regulating amyloid formation. ChemBioChem 2024, 25 (5). DOI: 10.1002/cbic.202300727.

2.       Tao, Z. Q.; Zhao, X. L.; Wang, H.; Zhang, J.; Jiang, G. S.; Yu, B.; Chen, Y. H.; Zhu, M. J.; Long, J. L.; Yin, L.; et al. A method for rapid nanobody screening with no bias of the library diversity. Iscience 2024, 27 (2). DOI: 10.1016/j.isci.2024.108966.

3.       Liu, B. A.; Liu, C. X.; Zhou, X.; Fan, X. Y.; Huang, T.; Zhan, J. H.; Zhu, Q. J.; Zeng, D. Y.; Gong, Z.; He, L. C.; et al. Real-Time NMR-Based Drug Discovery to Identify Inhibitors against Fatty Acid Synthesis in Living Cancer Cells. Analytical Chemistry 2024, 96 (7), 3034-3043. DOI: 10.1021/acs.analchem.3c04954.

4.       Yu, G. J.; Chen, Y. H.; Peng, Y.; Wang, G.; Zhu, M. J.; Zhao, X. L.; Yang, M. H.; Zhang, X.; Liu, M*. L.; He, L. C*. Temperature-Controllable Liquid Crystalline Medium for Stereochemical Elucidation of Organic Compounds via Residual Chemical Shift Anisotropies. Analytical Chemistry 2024, 96 (7), 2914-2919. DOI: 10.1021/acs.analchem.3c04477.

5.       Zhan, J. H.; Zeng, D. Y.; Xiao, X.; Fang, Z. P.; Huang, T.; Zhao, B. B.; Zhu, Q. J.; Liu, C. X.; Jiang, B.; Zhou, X*.; et al. Real-Time Observation of Conformational Changes and Translocation of Endogenous Cytochrome c within Intact Mitochondria. Journal of the American Chemical Society 2024, 146 (7), 4455-4466. DOI: 10.1021/jacs.3c10216.

6.       Liu, C. X.; Chen, F. F.; Fan, X. Y.; Liu, B.; Chai, X.; He, S. P.; Huang, T.; Wang, X. H.; Liu, L. X.; Liu, H. L.; et al. Combined NMR and MS-based metabonomics and real-time PCR analyses reveal dynamic metabolic changes of Ganoderma lucidum during fruiting body growing. Food Research International 2024, 180. DOI: 10.1016/j.foodres.2024.114056.

7.       Wang, Q. Q.; Miao, Z. W.; Xiao, X. J.; Zhang, X.; Yang, D. W.; Jiang, B.*; Liu, M. L.* Prediction of order parameters based on protein NMR structure ensemble and machine learning. Journal of Biomolecular NMR 2024, 78 (2), 87-94. DOI: 10.1007/s10858-024-00435-w.

8.       Xiao, X. J.; Wang, Q. Q.; Chai, X.; Zhang, X.; Jiang, B.*; Liu, M. L.* Using neural networks to obtain NMR spectra of both small and macromolecules from blood samples in a single experiment. Commun Chem 2024, 7 (1). DOI: 10.1038/s42004-024-01251-x.

9.     X. Xiao, J.H. Zhan, B. Liu, Q.J. Zhu, G. Wang, D.Y. Zeng, C.X. Liu, B. Jiang, L.C. He, Z. Gong, X. Zhou, X. Zhang, M.L. Liu, Lysine methylation: A strategy to improve in-cell NMR spectroscopy of proteins, Analytica Chimica Acta 1324 (2024).

10.    Tao Huang, Xin Chai, Shuangli Li, Biao Liu, Jianhua Zhan, Xiaohua Wang, Xiong Xiao, Qinjun Zhu, Caixiang Liu, Danyun Zeng, Bin Jiang, Xin Zhou, Lichun He, Zhou Gong, Maili Liu,* and Xu Zhang* .Rapid Targeted Screening and Identification of Active Ingredients in Herbal Extracts through Ligand-Detected NMR and Database Matching. Analytical Chemistry. 2024. 

2023年

1.       C. Wang, Y. Liu, B. Yu, Y. Peng, X. Zhang, G. Jiang, L. He* and M. Liu*, Chem. – A Eur. J., DOI:10.1002/chem.202203965.

2.       H. Wang, Z. Tao, X. Zhao, G. Wang, Y. Chen and J. Zhang, Xu Zhang, Guocheng Jiang*, Maili Liu*, Lichun He*. 2023, ACS Appl Mater Interfaces. 2023,1–18.

3.       G. Wang, G. Yu, D. Gao, G. Jiang, H. Wang, T. Yuwen, X. Zhang, C. Li, D. Yang, L. He* and M. Liu*, J. Phys. Chem. Lett., 2023, 2772–2777.

4.       Shixing Qi，Yun Peng， Guan Wang， Xu Zhang， Maili Liu， Lichun He*. A tale of dual functions of SERF family proteins in regulating amyloid formation， ChemBioChem， 2023.

5.       Peng, Yun; Zhang, Zeting; He, Lichun; Li, Conggang; Liu, Maili*. NMR spectroscopy for metabolomics in the living system: recent progress and future challenges， Analytical and Bioanalytical Chemistry， 2023， accepted

6.       Zhang BR, *Gong Z, Zhao LL, An YX, Gao H, Chen J, Liang Z, Liu ML, Zhang YK, *Zhao Q, *Zhang LH, “Decoding Protein Dynamics in Cells Using Chemical Cross-Linking and Hierarchical Analysis”, Angew. Chem. Int. Ed, 2023, 35:e202301345

7.       Fan RY#, Zhao F#, Gong Z#, Chen YK, Yang B, Zhou C, Zhang J, Du ZM, Wang XM, Yin P, *Guo L, *Liu Z, “Insights into the mechanism of phospholipid hydrolysis by plant non-specific phospholipase C”, Nat. Commnu, 2023:14, 194

8.       Jin XH, Guan ZY, Hu N, He CJ, Yin P, *Gong Z, *Zhang DL, “Structural insight into how WDR4 promotes the tRNA N7-methylguanosine methyltransferase activity of METTL1”, Cell. Discov, 2023, 9:65

9.       Ning SB, Sun M, Dong X, Li AB, Zeng C, Liu ML, *Gong Z, *Zhao YJ, “Dynamic geometry design of cyclic peptide architectures for RNA structure”, Phys. Chem. Chem. Phys, 2023,25:27967

10.   Chai, X., Liu, C. X., Fan, X. Y., Huang, T., Zhang, X., Jiang, B., & Liu, M. L. (2023). Combination of peak-picking and binning for NMR-based untargeted metabonomics study. Journal of Magnetic Resonance, 351. 107429

11.   Chen, B. Y., Shi, B. R., Ge, X. Y., Fu, Z. F., Yu, H. Y., Zhang, X., Liu, C. X*., & Han, L. F*. (2023). Integrated metabolic and transcriptomic profiles reveal the germination-associated dynamic changes for the seeds of Cassia obtusifolia L. Phytochemical Analysis, 34 (2), 240-253.

12.   Kamal, G.M*.; Nazi, N.; Sabir, A.; Saqib, M.; Zhang, X*.; Jiang, B.; Khan, J.; Noreen, A.; Uddin, J.; Murtaza, S. Yield and Chemical Composition of Ginger Essential Oils as Affected by Inter-Varietal Variation and Drying Treatments of Rhizome. Separations 2023, 10, 186.

13.   Liu, H.; Gong, Z.; Zhao, Y*. Methods and Applications in Proteins and RNAs. Life 2023, 13, 672.

14.   Nazir, A*.; Tahir, M.S.; Kamal, G.M.; Zhang, X*.; Tahir, M.B.; Jiang, B.; Safdar, M. Fabrication of Ternary MoS2/CdS/Bi2S3-Based Nano Composites for Photocatalytic Dye Degradation. Molecules 2023, 28, 3167.

15.   Tang, Ziyi; Jiang, Wuqiao; Li, Shuangli; Huang, Xue; Yang, Yi; Chen, Xiaorong; Qiu, Jingyi; Xiao, Chuyu; Xie, Ying; Zhang, Xu; Li, Jianguo; Verma, Chandra Shekhar; He, Yun*; Yang, Aimin*. Design and evaluation of tadpole-like conformational antimicrobial peptides. Commun Biol 6, 1177 (2023).

16.   Jiaying Li, Jiahua Zhou, Hao Xu, Kailu Tian, He Zhu, Yao Chen, Yangyu Huang, Guosheng Wang, Zhou Gong, Hongqiang Qin*, and Mingliang Ye*. Journal of the American Chemical Society 2023 145 (9), 5252-5260

17.   Fang, Z. P.; Huang, T.; Chai, X.; Zhan, J. H.; Zhu, Q. J.; Sun, P.; Zeng, D. Y.; Liu, C. X.; Jiang, B.; He, L. C.; Zhou, X*.; Liu, M. L. *; Zhang, X., Protein methylation characterization using NMR without isotopic labeling. Talanta 2024, 268.

18.   Fu, Weitao; Yang, Hao; Hu, Chenxian; Liao, Jianing; Gong, Zhou; Zhang, Minkui; Ye, Shangxiang; Yang, Shuai; Lei, Yixuan; Sheng, Rong; Zhang, Zhiguo; Yao, Xiaojun; Tang, Chun*; Li, Dan*; Hou, Tingjun*. Small-Molecule Inhibition of Androgen Receptor Dimerization as a Strategy against Prostate Cancer. ACS CENTRAL SCIENCE,2023.

19.   Yan, Xuhui; Liu, Feiqing; Yan, Junjun; Hou, Mengjun; Sun, Min; Zhang, Delin; Gong, Zhou; Dong, Xu; Tang, Chun*; Yin, Ping*. (2023). Wtap–virma counteracts dsdna binding of the m6a writer mettl3–mettl14 complex and maintainsn6-adenosine methylation activity. Cell Discovery, 9(1).

2022年

1.         Zhichen Xu#, Dongjuan Chenc#, Tao Li, Jiayu Yan, Jiang Zhu, Ting He, Rui Hu, Ying Li*, Yunhuang Yang, Maili Liu, Microfluidic space coding for multiplexed nucleic acid detection via CRISPR-Cas12a and recombinase polymerase amplification, Nature Communications, 2022, 13, 6480.

2.         Biao Wang#, Bang‑Shun He#, *, Xiao‑Lan Ruan, Jiang Zhu, Rui Hu, Jie Wang, Ying Li*, Yun‑Huang Yang, Maili Liu, An integrated microfluidics platform with high‑throughput single‑cell cloning array and concentration gradient generator for efficient cancer drug effect screening, Military Medical Research, 2022, 9, 51.

3.         Shanshan Qin#, Xuliang Chen#, Zhichen Xu, Tao Li, Shuhong Zhao, Rui Hu, Jiang Zhu, Ying Li*, Yunhuang Yang*, Maili Liu, Telomere G‑triplex lights up Thioflavin T for RNA detection: new wine in an old bottle, Analytical and Bioanalytical Chemistry, 2022, 414, 6149–6156.

4.         Zheyu Li, Yue Xiong, Shuangli Li, Jiang Zhu, Rui Hu*, Ying Li*, Yunhuang Yang, Maili Liu, A fast microfluidic mixer enabling rapid preparation of homogeneous PEG and bicelle media for RDC in NMR analysis, Chemical Engineering Journal, 2022, 431, 133817.

5.         Liu CX, Chen FF, Liu LL, Fan XY, Liu HL, Zeng DY and Zhang X*. The different metabolic responses of resistant and susceptible wheats to Fusarium graminearum inoculation. Metabolites, 2022, 12(8), 727.

6.         Chen BY, Shi BR, Gea XY, Fu ZF, Yu HY, Zhang X, Liu CX* and Han LF*, Integrated metabolic and transcriptomic profiles reveal the germination-associated dynamic changes for the seeds of Cassia obtusifolia L. Just Accepted by Phytochemical Analysis, 2022, doi: 10.1002/pca.3200

7.         Jin, Y.; Yu, G.; Yuwen, T.; Gao, D.; Wang, G.; Zhou, Y.; Jiang, B.; Zhang, X.; Li, C.; He, L*.; Liu, M*. Molecular Insight into the Extracellular Chaperone Serum Albumin in Modifying the Folding Free Energy Landscape of Client Proteins. J. Phys. Chem. Lett. 2022, 13, 2711–2717.

8.         Yu, G.; Wang, G.; Duan, M.; Jiang, B.; Zhang, X.; Li, C.; He, L*.; Liu, M*. Self-Assembled Oligopeptide (FK) 4 as a Chiral Alignment Medium for the Anisotropic NMR Analysis of Organic Compounds. ACS Appl. Mater. Interfaces 2022.

9.         Liu, Y.; Wang, C.; Jin, Y.; Jiang, G.; He, L*.; Liu, M*. Backbone Resonance Assignments and Dynamics of S. Cerevisiae SERF. Biomol. NMR Assign. 2022, 4–7.

10.      Zhou Gong, Ju Yang, Ling-Yun Qin, Chun Tang, Hanqiu Jiang, Yubin Ke, Xu Dong*, “Preferential regulation of transient protein-protein interaction by the macromolecular crowders”, J Phys Chem B, 126:4840-4848, 2022

11.      Jian-Hua Wang#, Zhou Gong#, Xu Dong, Shu-Qun Liu, Yu-Liang Tang, Xiaoguang Lei, Chun Tang, Meng-Qiu Dong*, “Preferential cross-linking of the sterospecific complex over the encounter complexes by DOPA2, a faster cross-linker than DSS”, Biophys Rep, 2022, in press

12.      Yingxue Ma, Haozheng Li, Zhou Gong, Shuai Yang, Ping Wang, Chun Tang*, “Nucleobase clustering contributes to the formation and hollowing of repeat-expansion RNA condensate”, J Am Chem Soc, 144:4716-4720, 2022

13.      Xu Dong, Ling-Yun Qin, Zhou Gong, Sanbo Qin, Huan-Xiang Zhou, Chun Tang*, “Preferential interactions of a crowder protein with the specific binding site of a native protein complex”, J Phys Chem L, 13:792-800, 2022

14.      Jian-Hua Wang, Yu-Liang Tang, Zhou Gong, Rohit Jain, Fan Xiao, Yu Zhou, Dan Tan, Qiang Li, Niu Huang, Shu-Qun Liu, Keqiong Ye, Chun Tang, Meng-Qiu Dong, Xiaoguang Lei*, “Characterization of protein unfolding by fast cross-linking mass spectrometry using di-ortho-phthalaldehyde cross-linkers”, Nat Commun, 13:1468, 2022

15.      Hang Gao, Qun Zhao, Zhou Gong, Bowen Zhong, Jing Chen, Zhigang, Sui, Xiao Li, Zhen Liang, Yukui Zhang, Lihua Zhang*, “Alkynyl-enrichable carboxyl-selective crosslinkers to increase the crosslinking coverage for deciphering protein structures”, Anal Chem, 94:12398-12406, 2022

16.      Hang Go, Lili Zhao, Bowen Zhong, Beirong Zhang, Zhou Gong, Baofeng Zhao, Yi Liu, Qun Zhao, Lihua Zhang*, Yukui Zhang, “In-depth in vivo crosslinking in minutes by a compact, membrane permeable, and alkynyl-enrichable crosslinker”, Anal Chem, 94:7551-7558, 2022

17.      Yuxin An, Qun Zhao, Zhou Gong, Lili Zhao, Yi Li, Zhen Liang, Peng Zou, Yukui Zhang, Lihua Zhang*, “Suborganelle-specific protein complex analysis enabled by in vivo cross-linking coupled with proximal labeling”, Anal Chem, 94:12051-12059, 2022

2021年

1.       Bin Yuan, Zhiming Zhou, Bin Jiang, Ghulam Mustafa Kamal, Xu Zhang, Conggang Li, Xin Zhou, and Maili Liu*, NMR for Mixture Analysis: Concentration-Ordered Spectroscopy, Anal Chem，2021, 93, 9697-703

2.       Ling-Yun Qin, Zhou Gong, Kan Liu, Xu Dong* and Chun Tang*, “Kinetic constraints in the specific interaction between phosphorylated ubiquitin and proteasomal shuttle factors”, Biomolecules, 11:1008, 2021

3.       Cezary Cezplewski, Zhou Gong, Emilia A. Lubecka, Kai Xue, Chun Tang* and Adam Liwo*, “Recent developments in data-assisted modeling of flexible proteins”, Front in Mol Bio, 8:765562, 2021

4.       Mateusz Kogut, Zhou Gong, Chun Tang, Adam Liwo*, “Pseudopotentials for coarse-grained cross-link-assisted modeling of protein structure”, J Comput Chem, 5:2054-2067, 2021

5.       Weitao Fu, Minkui Zhang, Jianing Liao, Qing Tang, Yixuan Lei, Zhou Gong, Luhu Shan, Mojie Duan, Xin Chai, Jinping Pang, Chun Tang, Xuwen Wang, Xiaohong Xu, Dan Li, Rong Sheng, Tingjun Hou*, “Discovery of a novel androgen receptor antagonist manifesting evidence to disrupt the dimerization of the ligand-binding domain via attenuating the hydrogen-bonding network between the two moNomers”, J Med Chem, 64:17221-17238, 2021

6.       Jianhua Zhan, Guangqing Zhang, Xin Chai, Qinjun Zhu, Peng Sun, Bin Jiang, Xin Zhou, Xu Zhang*, Maili Liu*, NMR Reveals the Conformational Changes of Cytochrome C upon Interaction with Cardiolipin, life, 2021, 11(10): 1031

7.       Chen WN, Wang P, Chen HX, Xing YC, Liu CX*, Pan GX, Dou ZY and Han LF*, The composition differences between small black beans and big black beans from different habitats and its effects on the processing of Polygonum multiflorum. Phytochemical Analysis, 2021, 32: 767-779.

8.       W. He, G. Yu, T. Li, L. Bai, Y. Yang, Z. Xue, Y. Pang, D. Reichmann, S. Hiller, L. He*, M. Liu* and S. Quan* Chaperone Spy Protects Outer Membrane Proteins from Folding Stress via Dynamic Complex Formation. MBio (2021).

9.       Z Chai, Q Wu, K Cheng, X Liu, L Jiang, M Liu* and C Li*, Simultaneous detection of small molecule thiols with a simple 19F NMR platform, Chemical Science, 2021, 12(3), 1095-1100

10.   Z Miao, Q Wang, X Xiao, GM Karmal, L Song, X Zhang, C Li, X Zhou, B Jiang* and M Liu*, CSI-LSTM: a web server to predict protein secondary structure using bidirectional long short term memory and NMR chemical shifts, J. Biomol. NMR 2021, 75, 393-400

11.   Y Li*, T Li, B Liu, R Hu, J Zhu, T He, X Zhou, C Li, Y Yang, and M Liu*, CRISPR-Cas12a trans-cleaves DNA G-quadruplexes, Chem. Commun. 2020, 56, 12526-29

2020年

1.       Zhou Gong*, Shuai Yang, Xu Dong, Qing-Fen Yang, Yue-Ling Zhu, Yi Xiao and Chun Tang*, “Hierarchical conformational dynamics confers thermal adaptability to preQ1 RNA riboswitches”, J. Mol. Biol, 432:4523-4543, 2020. 

2.       Zhou Gong, Shang-Xiang Ye, Ze-Feng Nie and Chun Tang*, “The conformational preference of chemical cross-linkers determines the cross-linking probability of reactive protein residues”, J Phys Chem B, 124:4446-4453, 2020

3.       Zhou Gong, Shang-Xiang Ye, Chun Tang*, “Tightening the crosslinking distance restraints for better resolution of protein structure and dynamics”, Structure, 28:1160-1167, 2020

4.       Ju Yang#, Zhou Gong#, Yun-Bi Lu, Chan-Juan Xu, Tao-Feng Wei, Meng-Shi Yang, Tian-Wei Zhan, Yu-Hong Yang, Li Lin, Jianfeng Liu*, Chun Tang* and Wei-Ping Zhang*. “FLIM-FRET-based structural characterization of a class-A GPCR dimer in the cell membrane”, J. Mol. Biol, 432:4596-4661, 2020.

5.       Chun Tang* and Zhou Gong, “Integrating non-NMR distance restraints to augment NMR depiction of protein structure and dynamics”, J. Mol. Biol, 432:2913-2929, 2020.

6.       Yuanlei Cheng, Yashuo Zhang, Zhou Gong, Xinghua Zhang, Yutong Li, Xiangqian Shi, Yufeng Pei, Huijuan You*, “High mechanical stability and slow unfolding rates are prevalent in parallel-stranded DNA G-quadruplexes”, J Phys Chem L, 11:7966-7971,2020

7.       Ling Ma, Xiang Wang, Zeyua Guan, Lixia Wang, Yidong Wang, Le Zheng, Zhou Gong, Cuicui Shen, Jing Wang, Delin Zhang, Zhu Liu and Ping Yin*, “Structural insights into BIC-mediated inactivation of Arabidopsis cryptochrome 2”, Nat Struct Mol Biol, 27:472-479, 2020

8.       Y Hu*, C Li, L He, C Jin, and M Liu*, Mechanisms of Chaperones as Active Assistant/Protector for Proteins: Insights from NMR Studies, Chin. J. Chem. 2020, 38, 406-13

9.       Wang LM, Wang P, Teka T, Youcai Zhang Y, Yang WZ, Zhang Y, Wang T, Liu LX, Han LF*, Liu CX*. 1H-NMR and UHPLC/Q-Orbitrap-MS based metabolomics combined with 16S rRNA gut microbiota analysis revealed the potential regulation mechanism of nuciferine in hyperuricemic rats. Journal of Agriculture and Food Chemistry 2020, 68, 14059-14070.

10.   X. Wang, W. Zou, G. M. Kamal, J. Wang, M. Zhou, L. Chen, B. Jiang, M. Khalidd, X. Zhang*, and M. Liu*, An untargeted C-13 isotopic evaluation approach for the discrimination of fermented food matrices at natural abundance: Application to vinegar, Talanta, 2020, 120, 210679

11.   H. Wan, Y. F. Tian, H. P. Jiang*, X. Zhang* and X. L. Ju, A NMR-based drug screening strategy for discovering active substances from herbal medicines: Using Radix Polygoni Multiflon as example, Journal of Ethnopharmacology, 2020, 254, 112712

12.   B. Yuan, X. Zhang, H. Kamal, B. Jiang* and M. L. Liu*, Accurate estimation of diffusion coefficient for molecular identification in a complex background, Analytical and Bioanalytical Chemistry, 2020, 412(19), 4519-4525

13.   L. H. Song, J. N. Wang, X. C. Su, X. Zhang, C. G. Li, X. Zhou, D. Yang, B. Jiang* and M. Liu*, REAL-t(1), an Effective Approach for t(1)-Noise Suppression in NMR Spectroscopy Based on Resampling Algorithm, Chinese Journal of Chemistry 2020, 38(1), 77-81

14.   J Zhang, J Fan, S Li, Y Yang, P Sun, Q Zhu, J Wang, B Jiang, D Yang*, and M Liu*, Structural basis of DNA binding to human YB-1 cold shock domain regulated by phosphorylation, Nucleic Acids Res. 2020, 48, 9361-71