Lab Publications
# These authors contribute equally; * Corresponding author.
Research Articles
Ying Wei (魏颖), Shu-Guang Wang, Peng-Fei Xia*. Blue valorization of lignin-derived monomers via reprogramming marine bacterium Roseovarius nubinhibens. Applied and Environmental Microbiology. 2024. 90, 7, e00890-24 入选期刊Spotlight Selection精选论文 (Articles of Significant Interest in This Issue) !
Xiao-Yan Wang (王晓妍), Ying Wei, Li-Juan Feng, Xian-Zheng Yuan, Shu-Guang Wang, Peng-Fei Xia*. Marine Roseobacter clade bacteria decelerate the conversion of dimethylsulfoniopropionate under ocean acidification. ACS ES&T Water. 2024. 4, 7, 3068–3077
Pei-Ru Chen (陈霈儒), Peng-Fei Xia*. Carbon recycling with synthetic CO2 fixation pathways. Current Opinion in Biotechnology, 2024. 85, 103023.
Ying Wei (魏颖), Li-Juan Feng, Xian-Zheng Yuan, Shu-Guang Wang, Peng-Fei Xia*. Developing a base editing system for marine Roseobacter clade bacteria. ACS Synthetic Biology, 2023. 12, 7, 2178 – 2186.
Xin Li (李馨), Nan Bao, Zhen Yan, Xian-Zheng Yuan, Shu-Guang Wang*, Peng-Fei Xia*. Degradation of antibiotic resistance genes by VADER with CRISPR-Cas immunity. Applied and Environmental Microbiology, 2023. 89, 4, e00053-23.
Shu-Yan Wang (王舒妍), Xin Li, Shu-Guang Wang, Peng-Fei Xia*. Base editing for reprogramming cyanobacterium Synechococcus elongatus. Metabolic Engineering, 2023. 75, 91 – 99. 王舒妍，2018级本科生，山东大学优秀毕业生、山东大学优秀学士学位论文获得者(全学院2人)，目前在浙江大学攻读博士学位(推免直博) 山大视点-学术纵横
Hai-Yan Yu, Shu-Guang Wang, Peng-Fei Xia*, Reprogramming microbial CO2-metabolizing chassis with CRISPR-Cas systems. Frontiers in Bioengineering and Biotechnology, 2022. 10, 897204.
Collaborative Articles
Jing-Ya Ma, Zhen Yan, Xiao-Dong Sun, Yu-Qian Jiang, Jian-Lu Duan, Li-Juan Feng, Fan-Ping Zhu, Xiao-Yu Liu, Peng-Fei Xia, Xian-Zheng Yuan*. A hybrid photocatalytic system enables direct glucose utilization for methanogenesis. Proceedings of the National Academy of Sciences of the United States of America, 2024. 121 (4) e2317058121
Jian-Lu Duan, Jing-Ya Ma, Xiao-Dong Sun, Xiao-Yu Liu, Yue Wang, Lin Du, Peng-Fei Xia, Xian-Zheng Yuan*. Bubbles expand the dissemination of antibiotic resistance in the aquatic environment. Environmental Science and Technology, 2023. 57, 27, 10079–10088
Lin-Rui Tan, Jing-Jing Liu, Anshu Deewan, Jae Won Lee, Peng-Fei Xia, Christopher Rao, Yong-Su Jin*, Shu-Guang Wang*. Genome-wide transcriptional regulation in Saccharomyces cerevisiae in response to carbon dioxide. FEMS Yeast Research, 2022. foac032.
Lin-Rui Tan, Yi-Qi Cao, Jian-Wei Li, Peng-Fei Xia, Shu-Guang Wang*. Transcriptomics and metabolomics of engineered Synechococcus elongatus during photomixotrophic growth. Microbial Cell Factories, 2022. 21, 31.
Jing Qin, Peng-Fei Xia, Xian-Zheng Yuan, Shu-Guang Wang*. Chlorine disinfection elevates the toxicity of polystyrene microplastics to human cells by inducing mitochondria-dependent apoptosis. Journal of Hazardous Materials, 2021. 425, 127842.
Previous Publications (selected)
Peng-Fei Xia*, Isabella Casini, Sarah Schulz, Christian-Macro Klask, Largus T. Angenent, Bastian Molitor. Reprogramming acetogenic bacteria with CRISPR-targeted base editing via deamination. ACS Synthetic Biology, 2020. 9, 2162–2171.
Peng-Fei Xia, Ling Hua, Jee Loon Foo*, Matthew Wook Chang*. Synthetic genetic circuits for programmable biological functionalities. Biotechnology Advances, 2019. 37, 107393.
Peng-Fei Xia, Ling Hua, Jee Loon Foo*, Matthew Wook Chang*. Synthetic biology toolkits for metabolic engineering of cyanobacteria. Biotechnology Journal, 2019. 14, 1800496.
Peng-Fei Xia, Qian Li, Lin-Rui Tan, Miao-Miao Liu, Yong-Su Jin, Shu-Guang Wang*. Synthetic whole-cell biodevices for targeted degradation of antibiotics. Scientific Reports, 2018. 8, 2906.
Peng-Fei Xia, Guo-Chang Zhang, Berkley Walker, Seung-Oh Seo, Suryang Kwak, Jing-Jing Liu, Heejin Kim, Donald R. Ort, Shu-Guang Wang, Yong-Su Jin*. Recycling carbon dioxide during xylose fermentation by engineered Saccharomyces cerevisiae. ACS Synthetic Biology, 2017. 6, 276 – 283. Featured in ACS Synthetic Biology article “Introducing Our Authors”
Peng-Fei Xia, Guo-Chang Zhang, Jing-Jing Liu, Suryang Kwak, Ching-Sung Tsai, In Iok Kong, Bong Hyun Sung, Jung-Hoon Sohn, Shu-Guang Wang, Yong-Su Jin*. GroE chaperonins assisted functional expression of bacterial enzymes in Saccharomyces cerevisiae. Biotechnology and Bioengineering, 2016. 113, 2149 – 2155. Highlighted in Biotechnology and Bioengineering “Spotlight”
