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The Landscape of Circulating Tumor DNA (ctDNA) in Appendiceal Adenocarcinoma
Clinical Cancer Research ( IF 10.0 ) Pub Date : 2024-12-16 , DOI: 10.1158/1078-0432.ccr-24-2474
Michael G. White, Mohammad A. Zeineddine, Eleanor A. Fallon, Fadl A. Zeineddine, Julia Dansby, Saikat Chowdhury, Nicholas Hornstein, Abdelrahman Yousef, Mahmoud Yousef, Neal Bhutiani, Yue Gu, Bryan Kee, Arvind Dasari, Michael J. Overman, Kanwal Raghav, Scott Kopetz, Abhineet Uppal, Melissa Taggart, Timothy Newhook, Keith Fournier, Beth Helmink, Leylah M. Drusbosky, John Paul Shen

Purpose: Appendiceal adenocarcinoma (AA) is a rare malignancy with distinct histopathologic subtypes and a natural history with metastasis primarily limited to the peritoneum. Little is known about the molecular pathogenesis of AA relative to common tumors. Experimental Design: We analyzed molecular data for patients within the Guardant Health database with appendix cancer (n = 718). We then identified patients with AA at our institution (from 10/2004-9/2022) for whom circulating tumor DNA (ctDNA) mutation profiling (liquid biopsy) was performed (n=168) and extracted clinicopathologic and outcomes data. Of these 168 patients 57 also had tissue-based tumor mutational profiling allowing for evaluation of concordance between liquid and tissue assays. Results: The mutational landscape of ctDNA in AA is distinct from tissue-based sequencing, with TP53 being the most frequently mutated (46%). Relative to other tumors, AA appears less likely to shed ctDNA, with only 38% of metastatic AA patients having detectable ctDNA (OR 0.26, p < 0.0001 relative to CRC). When detectable the median VAF was significantly lower in AA (0.4% vs. 1.3% for CRC, p≤0.001). High grade, signet-ring or colonic-type histology, metastatic spread beyond the peritoneum, and TP53 mutation were associated with detectable ctDNA. With respect to clinical translation, patients with detectable ctDNA had worse overall survival (HR = 2.32, p = 0.048). In the Guardant Health cohort actionable mutations were found in 93 patients (13.0%). Conclusions: Although metastatic AA tumors are less likely to shed tumor DNA into the blood relative to CRC, ctDNA profiling in AA has clinical utility.

中文翻译:


阑尾腺癌中循环肿瘤 DNA (ctDNA) 的景观



目的: 阑尾腺癌 (AA) 是一种罕见的恶性肿瘤,具有不同的组织病理学亚型和转移主要局限于腹膜的自然病程。相对于常见肿瘤,AA 的分子发病机制知之甚少。实验设计:我们分析了 Guardant Health 数据库中阑尾癌患者的分子数据 (n = 718)。然后,我们在我们机构确定了 AA 患者 (从 2004 年 10 月 - 2022 年 9 月),他们进行了循环肿瘤 DNA (ctDNA) 突变分析(液体活检) (n=168) 并提取临床病理和结局数据。在这 168 名患者中,57 名还进行了基于组织的肿瘤突变分析,从而可以评估液体和组织检测之间的一致性。结果: AA 中 ctDNA 的突变景观与基于组织的测序不同,TP53 是最常见的突变 (46%)。相对于其他肿瘤,AA 似乎不太可能脱落 ctDNA,只有 38% 的转移性 AA 患者具有可检测到的 ctDNA (OR 0.26,相对于 CRC 的 p < 0.0001)。当可检测到时,AA 的中位 VAF 显着降低 (0.4% vs. CRC 为 1.3%,p≤0.001)。高级别、印记环或结肠型组织学、腹膜外转移扩散和 TP53 突变与可检测的 ctDNA 相关。在临床翻译方面,可检测到 ctDNA 的患者总生存期较差 (HR = 2.32,p = 0.048)。在 Guardant Health 队列中,在 93 例患者 (13.0%) 中发现了可操作的突变。结论: 尽管相对于 CRC,转移性 AA 肿瘤不太可能将肿瘤 DNA 脱落到血液中,但 AA 中的 ctDNA 分析具有临床实用性。
更新日期:2024-12-16
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