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粗粒化建模小工具
发布时间:2023-01-30

MArtini Database

https://mad.ibcp.fr/explore



A coarse-grained simulation engine empowered by openMM

OpenMM codebase for IDP which uses HPS-Urry/HPS-KR force field

https://github.com/qvv5013/hpsOpenMM



OpenABC (with openMM)

https://github.com/ZhangGroup-MITChemistry/OpenABC



UNRES - a package to carry out coarse-grained simulations of protein structure and dynamics

https://unres.pl/docs



Osprey-DPD - Open Source Polymer Research Engine-Dissipative Particle Dynamics 

https://github.com/Osprey-DPD/osprey-dpd