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1. Xu Y., Schroth A.W., Isles P., D. F. & Rizzo D.M. 2015. Quantile regression improves models of lake eutrophication with implications for ecosystem-specific management. Freshwater Biology, doi:10.1111/fwb.12615.
2. Xu Y., Schroth A.W. & Rizzo D.M. 2015. Developing a 21st Century framework for lake-specific eutrophication assessment using quantile regression. Limnology and Oceanography: Methods, 13, 237–249.
3. Xu Y., Boeing W. 2014. Modeling maximum lipid productivity of microalgae: Review and next step. Renewable and Sustainable Energy Reviews, 32: 29-39.
4. Xu Y., Boeing W. 2013. Mapping biofuel field: A bibliometric evaluation of research output. Renewable and Sustainable Energy Reviews, 28: 82-91.
5. Xu, Y., Cai, Q., Shao, M., Han, X. 2012. Patterns of asynchrony for phytoplankton fluctuations from reservoir mainstream to a tributary bay in a giant dendritic reservoir (Three Gorges Reservoir, China). Aquatic Sciences, 74: 287-300.
6. Xu, Y., Zhang, M., Wang, L., Kong, L., Cai, Q. 2011. Changes in water types under the regulated mode of water level in Three Gorges Reservoir, China. Quaternary International, 244: 272-279.
其它论文:
1. Xu, Y., Cai Q., Ye, L., Shao, M. 2011. Asynchrony of spring phytoplankton response to temperature driver within a spatial heterogeneity bay of Three-Gorges Reservoir, China. Limnologica, 41: 174-180.
2. Xu, Y., Shao, M., Han, X., Cai, Q. 2011. Temporal asynchrony of trophic status between mainstream and tributary bay with a giant dendritic reservoir: the role of local-scale regulators. Water, Air, & Soil Pollution, 219: 271-284.
3. Xu, Y., Shao, M., Cao, M., Zhou, S., Cai, Q. 2010. Using temporal coherence to determine the responses of water clarity to hydrological processes in a giant subtropical canyon-shaped reservoir (China). Quaternary International, 226: 151-159.
4. Xu, Y., Cai, Q., Wang, L., Kong, L., Li, D. 2010. Diel vertical migration of Peridiniopsis niei, Liu et al, a new species of dinoflagellates in an eutrophic bay of Three-Gorge Reservoir, China. Aquatic Ecology, 44: 387-395.
5. Xu, Y., Cai, Q., Han, X., Shao, M., Liu, R. 2010. Factors regulating trophic status in a large subtropical reservoir, China. Environmental Monitoring and Assessment, 169: 237-248.
6. Xu, Y., Cai, Q., Shao, M., Han, X., Cao, M. 2009. Seasonal dynamics of suspended solids in a giant subtropical reservoir (China) in relation to internal processes and hydrological features. Quaternary International, 208: 138-144.
7. Xu, Y., Wang, L., Cai, Q., Ye, L. 2009. Temporal coherence of chlorophyll a during a spring phytoplankton bloom in Xiangxi Bay of Three-Gorges Reservoir, China. International Review of Hydrobiology, 94: 656-672.
8. Xu, Y., Cai, Q., Ye, L., Zhou, S., Han, X. 2009. Spring diatom blooming phases in a representative eutrophic bay of the Three-Gorge Reservoir, China. Journal of Freshwater Ecology, 24: 191-198.
9. Isles P., Giles C., Gearhart T., Xu Y., Druschel G., Schroth A. 2015. Dynamic internal drivers of a historically severe cyanobacteria bloom in Lake Champlain revealed through comprehensive monitoring. Journal of Great Lakes Research, 41: 818-829.
10. Schroth A., Courtney G., Isles P., Xu Y., Perzan Z., Druschel G. 2015. Dynamic coupling of iron, manganese and phosphorus behaviour in water and sediment of shallow ice-covered eutrophic lakes. Environmental Science & Technology, 49: 9758–9767.
11.Zhang M., Cai Q., Xu Y., Kong L., Tan L., Wang L. 2012. Spatial distribution of macroinvertebrate community along a longitudinal gradient in a eutrophic reservoir-bay during different impoundment stages, China. International Review of Hydrobiology, 97 (3): 169-183.
12.Zhang M., Cai Q., Xu Y., Wang L., Kong L. 2012. Zonation and its influencing factors of a large subtropical reservoir (Danjiangkou Reservoir in Central China), based on macroinvertebrate. Fresenius Environmental Bulletin, 21(8):2095-2104.
13. Zhang M., Xu Y., Shao M., Cai Q. 2012. Sedimentary nutrients in the mainstream and its five tributary bays of a large subtropical reservoir (Three Gorges Reservoir, China). Quaternary International, 282: 171–177.
14.Wang, L., Cai, Q., Xu, Y., Kong, L., Tan, L., Zhang, M. 2011. Weekly dynamics of phytoplankton functional groups under high water level fluctuations in a subtropical reservoir-bay. Aquatic Ecology, 45: 197-212.
15.Zhou, S., Cai, Q., Xu, Y., Han, X. 2011. Daily and vertical dynamics of rotifers under the impact of diatom blooms in the Three Gorges Reservoir, China. Hydrobiologia, 675: 29-40.
16.Wang, L., Cai, Q., Zhang, M., Xu, Y., Kong, L., Tan, L. 2011. Vertical distribution patterns of phytoplankton in summer Microcystis bloom period of the Xiangxi Bay, Three Gorges Reservoir, China. Fresenius Environmental Bulletin, 20: 553-560.
17.Shao, M., Xu, Y., Cai, Q. 2010. Effects of reservoir mainstream on longitudinal zonation in reservoir bays. Journal of Freshwater Ecology, 25: 107-117.
18.Zhang, M., Shao, M., Xu, Y., Cai, Q. 2010. Effect of hydrological regime on macroinvertebrate community in Three-Gorges Reservoir, China. Quaternary International, 226: 129-135.
19.Wang, L., Cai, Q., Zhang, M., Xu, Y., Kong, L., Tan, L. 2010. Estimating in situ growth rate of Microcystis by FDC technique, with comparison of different sampling periods – A case study from Xiangxi Bay, Three Gorges Reservoir, China. Fresenius Environmental Bulletin, 19: 1576-1581.
20.Ye, L., Han, X., Xu, Y., Cai, Q. 2007. Spatial analysis for spring bloom and nutrient limitation in Xiangxi bay of Three Gorges Reservoir. Environmental Monitoring and Assessment, 127: 135-145.
21.Ye, L. Xu, Y., Han, X., Cai, Q. 2006. Daily dynamics of nutrient and chlorophyll a during a spring phytoplankton bloom in Xiangxi Bay of the Three-Gorges Reservoir. Journal of Freshwater Ecology, 21: 315-321.
22.徐耀阳,王岚,韩新芹,蔡庆华.2009.三峡水库香溪河库湾春季水华期间悬浮物动态.应用生态学报,20: 963-969.
23.徐耀阳,蔡庆华,黎道丰,王岚,孔令惠,余伟.2008.三峡水库香溪河库湾拟多甲藻昼夜垂直分布初步研究,武汉植物学研究,26: 608-612.
24.徐耀阳,叶麟,韩新芹,蔡庆华.2006.三峡水库香溪河库湾春季水华期间水体光学特征及相关分析.水生生物学报,30: 84-88.
25.李刚,Jason D. Stockwell,J. Ellen Marsden,徐耀阳.湖泊研究的新工具和新视野:第58届IAGLR年会观察.湖泊科学,2015,27(4):755-756.
26.张红叶,蔡庆华,孔令惠,徐耀阳,张敏,王岚.2012.丹江口水库生态系统健康综合评价.应用与环境生物学报,18:086~092.
27.申恒伦,蔡庆华,邵美玲,徐耀阳.2012.三峡水库香溪河流域梯级水库浮游植物群落结构特征.湖泊科学,24(2): 197-205.
28.申恒伦,徐耀阳,王岚,孔令惠,蔡庆华.2011.丹江口水库浮游植物时空动态及影响因素.植物科学学报,29(6): 683~690.
29.谭路,蔡庆华,徐耀阳,申恒伦.2011.三峡水库175m水位试验性蓄水后春季富营养化状态调查及比较.湿地科学,8: 331~338.
30.傅小城,叶麟,徐耀阳,蔡庆华.2010.黄河主要水系水环境与底栖动物调查研究.生态科学,29: 1-7.
31.孔令惠,蔡庆华,徐耀阳,王岚,张敏.2010.丹江口水库浮游轮虫群落季节变动特征及其与环境因子的关系.湖泊科学.22,941-949.
32.张敏,邵美玲,蔡庆华,徐耀阳,王岚,孔令惠.2010.丹江口水库大型底栖动物群落结构及其水质生物学评价.湖泊科学,22: 281-290.
33.李凤清,唐涛,蔡庆华,黎道丰,杨顺益,徐耀阳.2010.基于河流环境与生物复合指标的辽北地区河流生态系统健康评价.应用与环境生物学报,16: 38-45.
34.张敏,徐耀阳,邵美玲,蔡庆华.2009.三峡水库香溪河库湾底泥中总氮、总磷含量的时空分析.应用生态学报,20: 2799-2805.
35.张敏,蔡庆华,王岚,徐耀阳,孔令惠,谭路.2009.三峡水库香溪河库湾蓝藻水华生消过程初步研究.湿地科学,7: 230-234.
36.王岚,蔡庆华,张敏,谭路,徐耀阳,孔令惠.2009.三峡水库香溪河库湾夏季藻类水华的时空动态及其影响因素.应用生态学报,20: 1940-1946.37.徐耀阳,蔡庆华,黎道丰,王岚,孔令惠,余伟.2008.三峡水库香溪河库湾拟多甲藻昼夜垂直分布初步研究,武汉植物学研究,26: 608-612.
38.吴乃成,徐耀阳,唐涛,蒋万祥,黄亮,黎道丰,蔡庆华.2008.滇池入湖河流大清河河口段浮游藻类格局研究.生态科学,27: 212-216.
39.杨正健,徐耀阳,纪道斌,刘德富.2008.香溪河库湾春季影响叶绿素a的环境因子.人民长江,39: 33-35,45.
40.孔令惠,蔡庆华,王岚,徐耀阳,黎道丰,黄祥飞.2008.香溪河库湾春季水华期间浮游轮虫昼夜垂直迁移的研究.湿地科学,6: 512-517.
41.叶麟,徐耀阳,蔡庆华.2006.三峡水库香溪河库湾春季水华期间硝酸盐、磷酸盐的时空分布.水生生物学报,30: 75-79.
42.邵晓阳,徐耀阳,韩新芹,蔡庆华.2006.香溪河官庄坪库湾叶绿素a 及初级生产力的分布特征.水生生物学报,30: 95-100.
43.韩新芹,叶麟,徐耀阳,蔡庆华.2006.香溪河库湾春季叶绿素a 浓度动态变化及其影响因子分析.水生生物学报,30: 89–94