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Yan Chun, Jingjing Fang, Syed Adeel Zafar, Jiangyuan Shang, Jinfeng Zhao, Shoujiang Yuan and Xueyong Li. MINI SEED 2 (MIS2) encodes a receptor-like kinase that controls grain size and shape in rice. Rice, 2020, 13(1):7, DOI: 10.1186/s12284-020-0368-9
Syed Adeel Zafar, Hameed A., Khan A.S., Ashraf M., Qamar Z., Xueyong Li, and Kadambot H.M. Siddique. Agronomic, physiological and molecular characterization of rice mutants revealed key role of ROS and catalase in high temperature stress tolerance. Functional Plant Biology, 2020, 47(5):440-453. doi: 10.1071/FP19246.
Syed Adeel Zafar, Syed Shan-e-Ali Zaidi, Sneh Lata Singla-Pareek, Om Parkash Dhankher, Xueyong Li, Shahid Mansoor, and Ashwani Pareek. Engineering abiotic stress tolerance via CRISPR-Cas mediated genome editing. Journal of Experimental Botany, 2020, 71(2):470-479. doi: 10.1093/jxb/erz476.
Syed Adeel Zafar, Suyash B Patil, Muhammad Uzair, Jingjing Fang, Jinfeng Zhao, Tingting Guo, Shoujiang Yuan, Muhammad Uzair, Qian Luo, Jianxin Shi, Lukas Schreiber and Xueyong Li. DEGENERATED PANICLE AND PARTIAL STERILITY 1 (DPS1) encodes a CBS domain containing protein required for anther cuticle and panicle development in rice. New Phytologist, 2020, 225(1):356-375
Tingting Guo, Daofeng Wang, Jingjing Fang, Jinfeng Zhao, Shoujiang Yuan, Langtao Xiao and Xueyong Li. Mutations in the rice OsCHR4 gene, encoding a CHD3 family chromatin remodeler, induce narrow and rolled leaves with increased cuticular wax. International Journal of Molecular Sciences, 2019, 20(10), 2567; https://doi.org/10.3390/ijms20102567
Suyash Patil, Syed Adeel Zafar, Muhammad Uzair, Jinfeng Zhao, Jingjing Fang, Xueyong Li. An improved mesocotyl elongation assay for the rapid identification and characterization of strigolactone-related rice mutants. Agronomy, 2019, 9(4), 208; doi:10.3390/agronomy9040208
Jingjing Fang, Shoujiang Yuan, Chenchen Li, Dan Jiang, Linlin Jingjing Fang, Shoujiang Yuan, Chenchen Li, Dan Jiang, Linlin Zhao, Lixiang Peng, Jinfeng Zhao, Wenhui Zhang, and Xueyong Li. Reduction of ATPase activity in the rice kinesin protein Stemless Dwarf1 inhibits cell division and organ development. The Plant Journal, 2018, 96(3):620-634
Minxia Wang, Yanling Qin, Yan Chun, Jinfeng Zhao, Jingjing Fang, Syed Adeel Zafar, Baotai Guo, Xueyong Li. Characterization of a Novel Semi-dwarf GID1 Allele Identifies an Amino Acid Required for Its Interaction with SLR1 in Rice. Journal of Plant Growth Regulation, 2018, 37(3):840-848
Lihua Liu, Tingting Xie, Peng Peng, Haiyang Qiu, Jinfeng Zhao, Jingjing Fang, Suyash Bhimgonda Patil, Yiqin Wang, Shuang Fang, Jinfang Chu, Shoujiang Yuan, Wenhui Zhang, Xueyong Li. Mutations in the MIT3 gene encoding a caroteniod isomerase lead to increased tiller number in rice. Plant Science, 2018, 267:1-10.
Peng Peng, Lihua Liu, Jingjing Fang, Jinfeng Zhao, Shoujiang Yuan, Xueyong Li. The rice TRIANGULAR HULL1 protein acts as a transcriptional repressor in regulating lateral development of spikelet. Scientific Reports, 2017, 7: 13712. DOI:10.1038/s41598-017-14146-w
Ming Zhang, Jinfeng Zhao, Long Li, Yanan Gao, Linlin Zhao, Suyash Bhimgonda Patil, Jingjing Fang, Wenhui Zhang, Yuhong Yang, Ming Li, Xueyong Li. The Arabidopsis U-box E3 Ubiquitin ligase PUB30 Negatively Regulates Salt Tolerance by Facilitating BRI1 KINASE INHIBITOR 1 (BKI1) Degradation. Plant, Cell & Environment. 2017, 40(11):2831-2843.
Jinfeng Zhao, Linlin Zhao, Ming Zhang, Syed Adeel Zafar, Jingjing Fang, Ming Li, Wenhui Zhang, Xueyong Li. Arabidopsis E3 Ubiquitin ligases PUB22 and PUB23 Negatively Regulate Drought Tolerance by Targeting ABA Receptor PYL9 for Degradation. International Journal of Molecular Sciences, 2017, 18(9), 1841; doi:10.3390/ijms18091841
Linlin Zhao, Jingjing Fang, Jin Xing, Weina Liu, Peng Peng, Haixin Long, Jinfeng Zhao, Wenhui Zhang, Xueyong Li. Identification and functional analysis of two cotton orthologues of MAX2 which control shoot lateral branching. Plant Molecular Biology Reporter, 2017, 35(5): 480-490.
Yujia Leng, Yaolong Yang, Deyong Ren, Lichao Huang, Liping Dai, Yuqiong Wang, Long Chen, Zhengjun Tu, Yihong Gao, Xueyong Li, Li Zhu, Jiang Hu, Guangheng Zhang, Zhenyu Gao, Longbiao Guo, Zhaosheng Kong, Yongjun Lin, Qian Qian, and Dali Zeng. A Rice PECTATE LYASE-LIKE Gene Is Required for Plant Growth and Leaf Senescence. Plant Physiology, 2017, 174(2): 1151–1166.
Daofeng Wang, Yanling Qin, Jingjing Fang, Shoujiang Yuan, Lixiang Peng, Jinfeng Zhao, Xueyong Li. A Missense Mutation in the Zinc Finger Domain of OsCESA7 Deleteriously Affects Cellulose Biosynthesis and Plant Growth in Rice. PLoS One, 2016, 11(4):e0153993.
Jinfeng Zhao, Huapeng Zhou, Ming Zhang, Yanan Gao, Long Li, Ying Gao, Ming Li, Yuhong Yang, Yan Guo & Xueyong Li. Ubiquitin-specific protease 24 negatively regulates abscisic acid signaling in Arabidopsis thaliana. Plant, Cell & Environment, 2016, 39(2):427-40.
Dan Jiang, Jingjing Fang, Lamei Lou, Jinfeng Zhao, Shoujiang Yuan, Liang Yin, Wei Sun, Lixiang Peng, Baotai Guo, and Xueyong Li. Characterization of a null allelic mutant of the rice NAL1 gene reveals its role in regulating cell division. PLoS One, 2015, 10(2):e0118169.
Guangwen Lu, Fu-Qing Wu, Weixun Wu, Hong-Jun Wang, Xiao-Ming Zheng, Yunhui Zhang, Xiuling Chen, Kunneng Zhou, Mingna Jin, Zhijun Cheng, Xueyong Li, Ling Jiang, Haiyang Wang, and Jianmin Wan. Rice LTG1 is involved in adaptive growth and fitness under low ambient temperature. The Plant Journal, 2014, 78(3):468-80.
Yanan Gao, Guangquan Wang, Shoujiang Yuan, Yanling Qin, Jinfeng Zhao,Yanpei Zhang, Wenhui Zhang, Xueyong Li. Phenotypic analysis and molecular characterization of an allelic mutant of the D61 gene in rice. The Crop Journal, 2014, 2(4): 175-182.
Jinfeng Zhao, Tao Wang, Minxia Wang,Yuanyuan Liu, Shoujiang Yuan , Yanan Gao, Liang Yin, Wei Sun, Lixiang Peng, Wenhui Zhang, Jianmin Wan, Xueyong Li. DWARF3 Participates in an SCF Complex and Associates with DWARF14 to Suppress Rice Shoot Branching. Plant & Cell Physiology. 2014, 55(6):1096-1109.
Jinfeng Zhao, Huapeng Zhou, Xueyong Li. UBIQUITIN-SPECIFIC PROTEASE16 interacts with a HEAVY METAL ASSOCIATED ISOPRENYLATED PLANT PROTEIN27 and modulates cadmium tolerance. Plant Signaling & Behavior, 2013, 8(10), e25680.
Shoujiang Yuan, Tao Wang, Liang Yin, Jinfeng Zhao, Jianmin Wan, Xueyong Li. Cloning and expression of gene responsible for high-tillering dwarf phenotype in Indica rice mutant gsor23. Rice Science, 2013, 20(5): 320−328
Guangming He#, Beibei Chen#, Xuncheng Wang#, Xueyong Li#, Jigang Li#, Hang He, Mei Yang, Lu Lu, Yijun Qi, Xiping Wang and Xing Wang Deng. Conservation and divergence of transcriptomic and epigenomic variation in maize hybrids. Genome Biology, 2013, 14:R57 (# Co-first author)
Jinfeng Zhao, Chenxi Wu, Shoujiang Yuan, Liang Yin, Wei Sun, Qinglei Zhao, Baohua Zhao, Xueyong Li. Kinase activity of OsBRI1 is essential for brassinosteroids to regulate rice growth and development. Plant Science 199-200 (2013) 113-120.
Huapeng Zhou#, Jinfeng Zhao#, Yongqing Yang, Changxi Chen, Yanfen Liu, Xuehua Jin, Limei Chen, Xueyong Li, Xing Wang Deng, Karen S. Schumaker, and Yan Guo. UBIQUITIN-SPECIFIC PROTEASE 16 modulates salt tolerance in Arabidopsis by regulating Na+/H+ antiport activity and serine hydroxymethyltransferase stability. Plant Cell, 2012, 24: 5106–5122.
Daofeng Wang, Shoujiang Yuan, Liang Yin, Jinfeng Zhao, Baotai Guo, Jinhao Lan, Xueyong Li. A missense mutation in the transmembrane domain of CESA9 affects cell wall biosynthesis and plant growth in rice. Plant Science 196 (2012) 117–124.
Xiangfeng Wang#, Axel A. Elling#, Xueyong Li#, Ning Li, Zhiyu Peng, Guangming He, Hui Sun, Yijun Qi, X. Shirley Liu, and Xing Wang Deng. Genome-Wide and Organ-Specific Landscapes of Epigenetic Modifications and Their Relationships to mRNA and Small RNA Transcriptomes in Maize. Plant Cell. 2009, 21(4):1053-69. (# Co-first author).
Kun He, Xueyong Li, Junli Zhou, Xing-Wang Deng , Hongyu Zhao and Jingchu Luo. NTAP: For NimbleGen Tiling Array ChIP-chip Data Analysis. Bioinformatics. 2009, 25(14):1838-40.
Xueyong Li#, Xiangfeng Wang#, Kun He, Yeqin Ma, Ning Su, Hang He, Viktor Stolc, Waraporn Tongprasit, Weiwei Jin, Jiming Jiang, William Terzaghi, Songgang Li, and Xing Wang Deng. High-Resolution Mapping of Epigenetic Modifications of the Rice Genome Uncovers Interplay between DNA Methylation, Histone Methylation, and Gene Expression. Plant Cell. 2008, 20(2):259-76. (# Co-first author).
Ning Su, Kun He, Yuling Jiao, Chen Chen, Junli Zhou, Lei Li, Sulan Bai, Xueyong Li and Xing Wang Deng. Distinct reorganization of the genome transcription associates with organogenesis of somatic embryo, shoots, and roots in rice. Plant Molecular Biology 2007, 63(3), 337-349.
Lan Guo, Benliang Yin, Junli Zhou, Xueyong Li and Xing Wang Deng. Development of rabbit monoclonal and polyclonal antibodies for detection of site-specific histone modifications and their application in analyzing overall modification levels. Cell Research 2006, 16(5): 519–527.
Lei Li, Xiangfeng Wang, Viktor Stolc, Xueyong Li, Dongfen Zhang, Ning Su, Waraporn Tongprasit, Songgang Li, Zhukuan Cheng, Jun Wang & Xing Wang Deng. Genome-wide transcription analyses in rice using tiling microarrays. Nature Genetics 2006, 38 (1): 124 - 129
Viktor Stolc, Lei Li, Xiangfeng Wang, Xueyong Li, Ning Su, Waraporn Tongprasit, Bin Han, Yongbiao Xue, Jiayang Li, Michael Snyder, Mark Gerstein, Jun Wang & Xing Wang Deng. A pilot study of transcription unit analysis in rice using oligonucleotide tiling-path microarray. Plant Molecular Biology 2005, 59(1): 137–149
Xueyong Li#, Qian Qian#, Zhiming Fu, Yonghong Wang, Guosheng Xiong, Dali Zeng, Xiaoqun Wang, Xinfang Liu, Sheng Teng, Fujimoto Hiroshi, Ming Yuan, Da Luo, Bin Han & Jiayang Li. Control of tillering in rice. Nature 2003, 422(6932): 618-621. (# Co-first author).
Qian Qian, Yunhai Li, Dali Zeng, Sheng Teng, Zhengke Wang, Xueyong Li, Zhigang Dong, Ning Dai, Lei Sun, Jiayang Li. Isolation and genetic characterization of a fragile plant mutant rice (Oryza sativa L.). Chinese Science Bulletin, 2001, 46(24): 2082–2085.
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